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Cord blood trans fatty acids and Gammaproteobacteria signatures associated with infant colic and excessive cryingA Clue in Cord Blood May Predict Which Babies Get Colic

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Key Takeaway
Consider cord blood trans fatty acids and Gammaproteobacteria as candidate predictors for infant colic, not diagnostic tools.

This exploratory cohort study analyzed cord blood samples from 405 infants born between 1999 and 2002 in the greater Boston, MA area, part of the Project Viva pre-birth cohort. The primary outcome was parent reports of colic and excessive crying behaviors at 6 months of age. Infants unaffected by colic served as the comparator group.

The analysis revealed that higher levels of trans fatty acids were present in cord blood from infants with colic and those with excessive crying without colic compared to unaffected infants. Similarly, an increased abundance of the Gammaproteobacteria signature was observed in these same groups. In contrast, no association was found between inflammatory and immune system cord blood biomarkers, including metabolites and cytokine stimulation, and either colic or excessive crying behaviors.

No adverse events, serious adverse events, discontinuations, or tolerability issues were reported, as safety data were not applicable to this observational biomarker study. A key limitation is that this was an exploratory study with no known biomarkers currently associated with the diagnosis of infant colic. The study proposes that colic biomarkers may be present closer to the manifestation of this clinical condition in early infancy.

Practice relevance suggests these specific biomarkers warrant further investigation as potential predictors, but they cannot currently be used for diagnosis. Causality was not established, and associations were investigated rather than confirmed. Clinicians should interpret these findings as preliminary data requiring validation before clinical application.

Infant colic is incredibly common, affecting up to 1 in 5 babies. Doctors call it an early "disorder of gut-brain interaction." This means the communication system between a baby’s digestive tract and their brain seems to be misfiring.

The result is episodes of intense, unsoothable crying, often with signs of abdominal pain.

For decades, colic has been a medical mystery. Parents are often told their baby will simply "grow out of it," which is true but not very helpful in the moment. More importantly, research now shows that colic can be a warning sign.

Studies link it to a higher chance of a child developing other conditions later, like allergies, migraines, and ongoing gut issues. This makes finding its root cause urgent.

The old way vs. the new way

Doctors have long suspected colic might be linked to gut bacteria, inflammation, or the immune system. But the evidence has been fuzzy. Most research has looked at these factors after the colic has already started.

That makes it a chicken-or-egg problem. Did the colic cause the change, or did the change cause the colic?

This new study asked a groundbreaking question: Could the clues be present from day one?

Scientists decided to look at the very first blood a baby has—the cord blood collected at birth. They searched for biological footprints that might predict colic months before the crying ever began.

How it works: A story written at birth

Think of a baby’s development as a complex story. The plot involves their immune system, their metabolism, and the microbes that live in and on them.

This research suggests the opening lines of that story—written in cord blood—might hint at a challenging chapter ahead.

The researchers looked for specific "characters" in the blood: unusual fats and bacterial signatures that shouldn’t normally be there in high amounts. Finding them at birth is like finding a tiny spoiler for a plot point that doesn’t happen until chapter six.

The team used data from over 400 babies born in the Boston area. They had saved cord blood samples from these infants’ births. Years later, they matched those samples to records of which babies were diagnosed with colic or had excessive crying at six months old.

It was a perfect chance to look backward in time.

The analysis revealed two standout clues in the cord blood of babies who later developed colic or excessive crying.

First, these babies had higher levels of trans fatty acids at birth. These are industrial fats found in some processed foods. They are not the healthy fats vital for brain development.

Second, scientists found more traces of a group of bacteria called Gammaproteobacteria. This is a signature often linked to inflammation and an imbalanced gut microbiome.

The most surprising finding, however, was what they didn’t see.

But here’s the twist.

The researchers tested for many other classic signs of inflammation and immune system activity. They looked at cytokines (immune messenger chemicals) and other metabolites.

Almost none of them were connected to colic.

This is a crucial detail. It means the story of colic may not be a simple tale of "inflammation." It might be a more specific story about certain fats and very early microbial signals.

This study, published in Frontiers in Medicine, is what scientists call "exploratory." Its goal was to find early clues, not prove cause and effect. The authors are clear that the two markers they identified are only "candidate predictors."

They propose an important idea: the full biological signature of colic might not be fully formed at birth. Instead, the condition might "turn on" closer to when symptoms appear, around 6 weeks of age. The cord blood clues could be just the first step in that process.

This does not mean there is a test for colic risk.

It is far too early for that. No parent or doctor can send cord blood to a lab for this purpose. The findings need to be confirmed in much larger, newer studies.

The practical takeaway is a shift in understanding. This research strengthens the idea that colic has a biological basis, present from the very beginning of life. It is not caused by anything a parent did or didn’t do.

If your baby has colic, it is not your fault.

This research has key limitations. The data is from babies born over 20 years ago. Diets and environments have changed. The sample size was also relatively small, and the study design can only show a link, not prove that these blood markers cause colic.

The path from a scientific clue to a tool in the clinic is long. Next, researchers must see if they can find these same markers in modern, larger groups of babies. They will need to understand exactly how these fats and bacterial signatures might influence a baby’s gut and nervous system.

The ultimate hope is that one day, identifying these early risks could lead to supportive, personalized strategies for infants and parents—long before the first wave of unexplained crying begins. For now, this study provides a promising new direction in solving a very old mystery.

Study Details

Study typeCohort
EvidenceLevel 3
PublishedApr 2026
View Original Abstract ↓
There are currently no known biomarkers associated with the diagnosis of infant colic, a common early disorder of gut brain interaction (DGBI) that has been found to predict adverse health outcomes, including atopy, migraines and other DGBIs. Infant colic manifests as unsoothable crying and is perceived to be associated with abdominal pain, differentiating it from other crying behaviors. Prior studies have postulated it may involve microbial dysbiosis as well as immunological and neurological dysregulation. The aim of our study was to investigate the associations of cord blood biomarkers at birth with parent reports of colic and excessive crying behaviors at 6 months of age. We used available data from Project Viva a pre-birth cohort based in the greater Boston, MA area. All infants were born between 1999 and 2002. Among participants with information on infant colic and cord blood biomarkers (n = 405), we found higher trans fatty acids and an increased abundance of Gammaproteobacteria signature in cord blood from infants with colic and those with excessive crying without colic, compared to those unaffected by colic. The majority of inflammatory and immune system cord blood biomarkers previously measured, including metabolites and cytokine stimulation, showed no association with either colic or excessive crying. This exploratory study examined cord blood biomarkers of inflammation or immune dysregulation to support the underlying mechanism of infant colic, and identified trans fatty acid levels and Gammaproteobacteria microbial signatures as possible candidate predictors. On the other hand, we also found a lack of association with most of the cord blood immune and neurological biomarkers that we assessed. In turn, we propose that colic biomarkers may be present closer to its manifestation as a clinical condition of early infancy.
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